Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS27775 | Not Available | Negative | 6426319 - 6427461 | 39762.9 |
| aldehyde dehydrogenase | CD58_RS27780 | Not Available | Negative | 6427647 - 6429140 | 52975.4 |
| cupin domain-containing protein | CD58_RS27785 | Not Available | Positive | 6429380 - 6429742 | 13492.7 |
| 50s ribosomal protein l33 | CD58_RS27790 | Not Available | Negative | 6429850 - 6430005 | 5988.39 |
| 50s ribosomal protein l28 | CD58_RS27795 | Not Available | Negative | 6430017 - 6430250 | 8952.02 |
| abc transporter substrate-binding protein | CD58_RS27800 | Not Available | Positive | 6430687 - 6432273 | 58076.2 |
| radc family protein | CD58_RS27805 | Not Available | Negative | 6432409 - 6433083 | 24959.1 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | CD58_RS27810 | Not Available | Positive | 6433229 - 6434437 | 42954.0 |
| dutp diphosphatase | CD58_RS27815 | Not Available | Positive | 6434443 - 6434898 | 16089.5 |
| metal abc transporter atp-binding protein | CD58_RS27820 | Not Available | Positive | 6435152 - 6436555 | 50880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
