Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | CD58_RS27725 | Not Available | Negative | 6416619 - 6417167 | 20028.1 |
| alanine racemase | CD58_RS27730 | Not Available | Negative | 6417296 - 6418369 | 38801.0 |
| rida family protein | CD58_RS27735 | Not Available | Negative | 6418467 - 6418820 | 12913.5 |
| d-amino acid dehydrogenase | CD58_RS27740 | Not Available | Negative | 6418792 - 6420096 | 47244.0 |
| lrp/asnc ligand binding domain-containing protein | CD58_RS27745 | Not Available | Positive | 6420252 - 6420740 | 18686.8 |
| ykgj family cysteine cluster protein | CD58_RS27750 | Not Available | Negative | 6420782 - 6421135 | 13090.8 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS27755 | Not Available | Positive | 6421282 - 6422595 | 47313.0 |
| duf1127 domain-containing protein | CD58_RS27760 | Not Available | Negative | 6422711 - 6422956 | 9330.38 |
| plp-dependent aminotransferase family protein | CD58_RS27765 | Not Available | Positive | 6423136 - 6424569 | 52864.0 |
| phospholipase d family protein | CD58_RS27770 | Not Available | Positive | 6424631 - 6426196 | 58305.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
