Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | CD58_RS27675 | Not Available | Positive | 6401414 - 6402907 | 53080.1 |
| aldose 1-epimerase family protein | CD58_RS27680 | Not Available | Negative | 6402914 - 6404128 | 44250.6 |
| methyl-accepting chemotaxis protein | CD58_RS27685 | Not Available | Negative | 6404516 - 6406492 | 70068.0 |
| lysr substrate-binding domain-containing protein | CD58_RS27690 | Not Available | Negative | 6406680 - 6407600 | 34428.5 |
| metal abc transporter atp-binding protein | CD58_RS27695 | Not Available | Positive | 6407751 - 6409150 | 49431.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS27700 | Not Available | Negative | 6409255 - 6410925 | 62260.1 |
| dna helicase rep | CD58_RS27705 | Not Available | Positive | 6411201 - 6413210 | 76485.5 |
| xanthine phosphoribosyltransferase | CD58_RS27710 | Not Available | Positive | 6413268 - 6413840 | 20335.9 |
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | CD58_RS27715 | Not Available | Negative | 6413969 - 6415891 | 70859.0 |
| c-type cytochrome | CD58_RS27720 | Not Available | Negative | 6416026 - 6416436 | 13747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
