Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | CD58_RS27630 | Not Available | Positive | 6393446 - 6394345 | 33731.4 |
| had family hydrolase | CD58_RS27635 | Not Available | Positive | 6394342 - 6395046 | 25885.6 |
| transcriptional regulator suta | CD58_RS27640 | Not Available | Negative | 6395258 - 6395581 | 11309.8 |
| secondary thiamine-phosphate synthase enzyme yjbq | CD58_RS27645 | Not Available | Negative | 6395683 - 6396108 | 15638.6 |
| ammonium transporter | CD58_RS27650 | Not Available | Negative | 6396321 - 6397655 | 46016.2 |
| p-ii family nitrogen regulator | CD58_RS27655 | Not Available | Negative | 6397689 - 6398027 | 12330.9 |
| accessory factor ubik family protein | CD58_RS27660 | Not Available | Positive | 6398442 - 6398702 | 9452.35 |
| sensor histidine kinase | CD58_RS27665 | Not Available | Negative | 6398720 - 6399997 | 46472.5 |
| hypothetical protein | CD58_RS31065 | Not Available | Positive | 6400458 - 6400724 | 9800.89 |
| bacteriocin immunity protein | CD58_RS27670 | Not Available | Positive | 6400853 - 6401107 | 9669.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
