Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS27580 | Not Available | Positive | 6385183 - 6385467 | 10836.5 |
| tigr02647 family protein | CD58_RS27585 | Not Available | Positive | 6385688 - 6385936 | 8749.49 |
| class i adenylate cyclase | CD58_RS27590 | Not Available | Positive | 6386116 - 6388959 | 108700.0 |
| nucleoside diphosphate kinase regulator | CD58_RS27595 | Not Available | Negative | 6388965 - 6389375 | 14779.6 |
| duf1289 domain-containing protein | CD58_RS27600 | Not Available | Negative | 6389681 - 6389899 | 8285.0 |
| iron donor protein cyay | CD58_RS27605 | Not Available | Negative | 6389904 - 6390236 | 12575.5 |
| lps translocon maturation chaperone lptm | CD58_RS29675 | Not Available | Positive | 6390442 - 6390612 | 5966.11 |
| diaminopimelate decarboxylase | CD58_RS27615 | Not Available | Positive | 6390622 - 6391869 | 45118.9 |
| diaminopimelate epimerase | CD58_RS27620 | Not Available | Positive | 6391874 - 6392704 | 30103.3 |
| duf484 family protein | CD58_RS27625 | Not Available | Positive | 6392718 - 6393443 | 26877.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
