Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potd/potf family extracellular solute-binding protein | CD58_RS02265 | Not Available | Positive | 524823 - 526019 | 44834.9 |
| thioredoxin trxc | CD58_RS02270 | Not Available | Negative | 526023 - 526445 | 15327.8 |
| isochorismate family cysteine hydrolase ycac | CD58_RS02275 | Not Available | Negative | 526617 - 527243 | 23020.4 |
| lysr family transcriptional regulator | CD58_RS02280 | Not Available | Positive | 527447 - 528352 | 33838.1 |
| hypothetical protein | CD58_RS02285 | Not Available | Positive | 528488 - 528766 | 9977.07 |
| metal abc transporter atp-binding protein | CD58_RS29820 | Not Available | Positive | 528821 - 528973 | 5557.67 |
| protein adenylyltransferase selo | CD58_RS02295 | Not Available | Negative | 529208 - 530671 | 55186.4 |
| mechanosensitive channel msck | CD58_RS02300 | Not Available | Negative | 530708 - 534070 | 124832.0 |
| potassium/proton antiporter | CD58_RS02305 | Not Available | Negative | 534105 - 535847 | 61272.6 |
| methyl-accepting chemotaxis protein | CD58_RS02310 | Not Available | Negative | 536136 - 537761 | 58370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
