Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftr1 family protein | CD58_RS27480 | Not Available | Negative | 6364552 - 6366450 | 67461.0 |
| cog3014 family protein | CD58_RS27485 | Not Available | Positive | 6366767 - 6368161 | 50553.2 |
| ycfl family protein | CD58_RS27490 | Not Available | Positive | 6368180 - 6368551 | 13286.2 |
| penicillin-binding protein activator lpob | CD58_RS27495 | Not Available | Positive | 6368714 - 6369301 | 21519.7 |
| hypothetical protein | CD58_RS27500 | Not Available | Positive | 6369305 - 6370048 | 27112.0 |
| homoserine/homoserine lactone efflux protein | CD58_RS27505 | Not Available | Negative | 6370185 - 6370817 | 22702.6 |
| mechanosensitive ion channel family protein | CD58_RS27510 | Not Available | Negative | 6370920 - 6371501 | 21091.5 |
| atp-binding cassette domain-containing protein | CD58_RS27515 | Not Available | Negative | 6371501 - 6373411 | 71065.7 |
| tigr02444 family protein | CD58_RS27520 | Not Available | Positive | 6373462 - 6373926 | 17302.6 |
| algp family protein | CD58_RS27525 | Not Available | Negative | 6373923 - 6375122 | 38746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
