Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | CD58_RS27430 | Not Available | Positive | 6353800 - 6354468 | 24562.6 |
| amino acid abc transporter permease | CD58_RS27435 | Not Available | Positive | 6354465 - 6355115 | 23514.2 |
| amino acid abc transporter atp-binding protein | CD58_RS27440 | Not Available | Positive | 6355102 - 6355836 | 26822.8 |
| exopolyphosphatase | CD58_RS27445 | Not Available | Positive | 6356097 - 6357599 | 56250.6 |
| polyphosphate kinase 1 | CD58_RS27450 | Not Available | Negative | 6357784 - 6360000 | 83106.5 |
| porphobilinogen synthase | CD58_RS27455 | Not Available | Negative | 6360018 - 6361031 | 37064.4 |
| deda family protein | CD58_RS27460 | Not Available | Positive | 6361237 - 6361860 | 23307.0 |
| sterol desaturase family protein | CD58_RS27465 | Not Available | Negative | 6361841 - 6363076 | 47003.0 |
| isoprenoid biosynthesis glyoxalase elbb | CD58_RS27470 | Not Available | Positive | 6363191 - 6363859 | 23366.0 |
| yaii/yqxd family protein | CD58_RS27475 | Not Available | Negative | 6363982 - 6364437 | 16364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
