Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase family protein | CD58_RS27380 | Not Available | Positive | 6341939 - 6342916 | 34104.2 |
| glycerol-3-phosphate transporter | CD58_RS27385 | Not Available | Positive | 6343132 - 6344481 | 49931.4 |
| gamma-glutamylcyclotransferase | CD58_RS27390 | Not Available | Negative | 6344457 - 6345125 | 25139.0 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | CD58_RS27395 | Not Available | Negative | 6345472 - 6346440 | 35627.7 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | CD58_RS27400 | Not Available | Negative | 6346440 - 6347906 | 54728.2 |
| acyltransferase family protein | CD58_RS27405 | Not Available | Negative | 6347986 - 6349941 | 72675.8 |
| transcription termination factor rho | CD58_RS27410 | Not Available | Negative | 6350078 - 6351337 | 46956.1 |
| thioredoxin trxa | CD58_RS27415 | Not Available | Negative | 6351579 - 6351908 | 11763.2 |
| fadr/gntr family transcriptional regulator | CD58_RS27420 | Not Available | Negative | 6352030 - 6352737 | 25365.6 |
| transporter substrate-binding domain-containing protein | CD58_RS27425 | Not Available | Positive | 6352993 - 6353778 | 28103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
