Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02449 family protein | CD58_RS27340 | Not Available | Positive | 6334127 - 6334336 | 8145.86 |
| cell division protein zapa | CD58_RS27345 | Not Available | Positive | 6334333 - 6334650 | 11581.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 6334681 - 6334860 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | CD58_RS27350 | Not Available | Positive | 6334978 - 6335583 | 23312.6 |
| hypothetical protein | CD58_RS31315 | Not Available | Negative | 6335623 - 6335769 | 5339.62 |
| eve domain-containing protein | CD58_RS27355 | Not Available | Positive | 6335965 - 6336414 | 16687.1 |
| hlyd family secretion protein | CD58_RS27360 | Not Available | Positive | 6336496 - 6337461 | 34695.5 |
| ribosome-associated atpase/putative transporter rbba | CD58_RS27365 | Not Available | Positive | 6337458 - 6340184 | 98991.2 |
| abc transporter permease | CD58_RS27370 | Not Available | Positive | 6340184 - 6341302 | 40454.1 |
| flagellar basal body-associated protein flil | CD58_RS27375 | Not Available | Negative | 6341372 - 6341788 | 15018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
