Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | CD58_RS27290 | Not Available | Positive | 6323962 - 6324411 | 16770.7 |
| duf2388 domain-containing protein | CD58_RS27295 | Not Available | Positive | 6324477 - 6324797 | 11099.4 |
| glycine cleavage system protein gcvh | CD58_RS27300 | Not Available | Negative | 6324977 - 6325360 | 13369.4 |
| glycine cleavage system aminomethyltransferase gcvt | CD58_RS27305 | Not Available | Negative | 6325413 - 6326495 | 39832.8 |
| abc transporter permease | CD58_RS27310 | Not Available | Negative | 6326652 - 6328268 | 59007.0 |
| extracellular solute-binding protein | CD58_RS27315 | Not Available | Negative | 6328487 - 6329491 | 36788.9 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | CD58_RS27320 | Not Available | Negative | 6329599 - 6330816 | 44157.3 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | CD58_RS27325 | Not Available | Negative | 6330896 - 6332083 | 43244.9 |
| xaa-pro aminopeptidase | CD58_RS27330 | Not Available | Negative | 6332080 - 6333414 | 49430.1 |
| yeca family protein | CD58_RS27335 | Not Available | Negative | 6333442 - 6333996 | 19681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
