Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | CD58_RS27240 | Not Available | Negative | 6312165 - 6312758 | 21582.1 |
| peroxiredoxin | CD58_RS27245 | Not Available | Negative | 6313071 - 6313709 | 23937.3 |
| oprd family outer membrane porin | CD58_RS27250 | Not Available | Negative | 6313994 - 6315319 | 47199.3 |
| amino-acid n-acetyltransferase | CD58_RS27255 | Not Available | Negative | 6315794 - 6317092 | 47727.3 |
| acetylornithine deacetylase | CD58_RS27260 | Not Available | Negative | 6317226 - 6318383 | 41526.2 |
| inorganic triphosphatase | CD58_RS27265 | Not Available | Positive | 6318542 - 6319909 | 52263.5 |
| lrp/asnc family transcriptional regulator | CD58_RS27270 | Not Available | Negative | 6320051 - 6320521 | 17723.5 |
| hypothetical protein | CD58_RS27275 | Not Available | Positive | 6320647 - 6320985 | 12527.0 |
| gspe/pule family protein | CD58_RS27280 | Not Available | Positive | 6321131 - 6322915 | 66330.9 |
| spfh domain-containing protein | CD58_RS27285 | Not Available | Positive | 6323032 - 6323952 | 33281.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
