Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | CD58_RS27190 | Not Available | Negative | 6301812 - 6303176 | 50042.4 |
| glutamine synthetase family protein | CD58_RS27195 | Not Available | Negative | 6303236 - 6304594 | 50961.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | CD58_RS27200 | Not Available | Negative | 6304635 - 6305411 | 27217.4 |
| glutamine synthetase family protein | CD58_RS27205 | Not Available | Positive | 6305690 - 6307066 | 51025.6 |
| tetr/acrr family transcriptional regulator | CD58_RS27210 | Not Available | Positive | 6307351 - 6307986 | 23446.2 |
| molybdopterin-binding protein | CD58_RS27215 | Not Available | Negative | 6308101 - 6308316 | 7620.33 |
| aliphatic sulfonates abc transporter atp-binding protein | CD58_RS27220 | Not Available | Negative | 6308342 - 6309148 | 29473.1 |
| aliphatic sulfonate abc transporter permease ssuc | CD58_RS27225 | Not Available | Negative | 6309145 - 6309927 | 28147.2 |
| fmnh2-dependent alkanesulfonate monooxygenase | CD58_RS27230 | Not Available | Negative | 6309935 - 6311083 | 41352.2 |
| sulfonate abc transporter substrate-binding protein | CD58_RS27235 | Not Available | Negative | 6311109 - 6312074 | 34602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
