Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6436 domain-containing protein | CD58_RS27140 | Not Available | Positive | 6290148 - 6290735 | 20997.0 |
| penicillin acylase family protein | CD58_RS27145 | Not Available | Positive | 6290837 - 6293245 | 88917.0 |
| carboxymuconolactone decarboxylase family protein | CD58_RS27150 | Not Available | Positive | 6293348 - 6293689 | 11897.3 |
| glxa family transcriptional regulator | CD58_RS27155 | Not Available | Negative | 6293701 - 6294666 | 34868.8 |
| hd domain-containing protein | CD58_RS27160 | Not Available | Positive | 6294855 - 6295493 | 23402.8 |
| abc transporter permease subunit | CD58_RS27165 | Not Available | Negative | 6296238 - 6297125 | 32253.3 |
| abc transporter permease subunit | CD58_RS27170 | Not Available | Negative | 6297122 - 6298042 | 34369.3 |
| abc transporter atp-binding protein | CD58_RS27175 | Not Available | Negative | 6298039 - 6299181 | 42347.2 |
| polyamine abc transporter substrate-binding protein | CD58_RS27180 | Not Available | Negative | 6299251 - 6300348 | 40140.1 |
| polyamine abc transporter substrate-binding protein | CD58_RS27185 | Not Available | Negative | 6300533 - 6301630 | 39536.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
