Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | CD58_RS27090 | Not Available | Positive | 6278524 - 6280365 | 65593.4 |
| phosphorylcholine phosphatase | CD58_RS27095 | Not Available | Negative | 6280610 - 6281665 | 39384.3 |
| l-cystine transporter | CD58_RS27100 | Not Available | Positive | 6281910 - 6283301 | 48321.6 |
| dihydrofolate reductase | CD58_RS27105 | Not Available | Negative | 6283414 - 6283926 | 18798.7 |
| duf2868 domain-containing protein | CD58_RS27110 | Not Available | Positive | 6284023 - 6285390 | 49908.0 |
| gtpase/duf3482 domain-containing protein | CD58_RS27115 | Not Available | Positive | 6285383 - 6286756 | 50177.2 |
| duf523 domain-containing protein | CD58_RS27120 | Not Available | Negative | 6286952 - 6287443 | 16920.3 |
| 2og-fe(ii) oxygenase | CD58_RS27125 | Not Available | Negative | 6287446 - 6288078 | 23795.4 |
| duf2059 domain-containing protein | CD58_RS27130 | Not Available | Positive | 6288220 - 6288963 | 26981.3 |
| alpha/beta hydrolase | CD58_RS27135 | Not Available | Negative | 6289092 - 6290039 | 35490.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
