Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | CD58_RS27040 | Not Available | Positive | 6268429 - 6270024 | 57494.7 |
| pantetheine-phosphate adenylyltransferase | CD58_RS27045 | Not Available | Positive | 6270140 - 6270619 | 17792.5 |
| yfhl family 4fe-4s dicluster ferredoxin | CD58_RS27050 | Not Available | Positive | 6270756 - 6271007 | 9288.95 |
| hypothetical protein | CD58_RS27055 | Not Available | Negative | 6271169 - 6271489 | 10759.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CD58_RS27060 | Not Available | Negative | 6271537 - 6272349 | 30140.9 |
| hdod domain-containing protein | CD58_RS27065 | Not Available | Negative | 6272394 - 6273209 | 30284.0 |
| class i sam-dependent rrna methyltransferase | CD58_RS27070 | Not Available | Positive | 6273401 - 6274597 | 43872.0 |
| sagb/thcox family dehydrogenase | CD58_RS27075 | Not Available | Positive | 6275038 - 6276117 | 40131.0 |
| diiron oxygenase | CD58_RS27080 | Not Available | Positive | 6276114 - 6277067 | 35882.8 |
| mfs transporter | CD58_RS27085 | Not Available | Positive | 6277060 - 6278265 | 42156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
