Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl synthase chain length factor | CD58_RS02215 | Not Available | Negative | 515056 - 515784 | 26861.0 |
| metal abc transporter atp-binding protein | CD58_RS02220 | Not Available | Positive | 516136 - 516902 | 28003.9 |
| gntr family transcriptional regulator | CD58_RS02225 | Not Available | Negative | 516919 - 517920 | 37439.6 |
| amidase | CD58_RS02230 | Not Available | Positive | 518267 - 519628 | 48039.3 |
| polysaccharide deacetylase family protein | CD58_RS02235 | Not Available | Positive | 519666 - 520547 | 33744.1 |
| mfs transporter | CD58_RS02240 | Not Available | Positive | 520575 - 521915 | 47472.3 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS02245 | Not Available | Positive | 521927 - 522688 | 26561.8 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS02250 | Not Available | Positive | 522759 - 523508 | 25908.3 |
| hypothetical protein | CD58_RS02255 | Not Available | Positive | 523523 - 523822 | 10899.2 |
| cobw family gtp-binding protein | CD58_RS02260 | Not Available | Positive | 523819 - 524823 | 36542.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
