Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division atp-binding protein ftse | CD58_RS26990 | Not Available | Negative | 6257511 - 6258182 | 24601.2 |
| signal recognition particle-docking protein ftsy | CD58_RS26995 | Not Available | Negative | 6258179 - 6259615 | 50953.6 |
| m16 family metallopeptidase | CD58_RS27000 | Not Available | Positive | 6259959 - 6261314 | 50029.5 |
| m16 family metallopeptidase | CD58_RS27005 | Not Available | Positive | 6261307 - 6262797 | 52837.2 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CD58_RS27010 | Not Available | Positive | 6262797 - 6263408 | 22441.7 |
| hydrolase | CD58_RS27015 | Not Available | Positive | 6263443 - 6264441 | 36730.5 |
| sulfurtransferase | CD58_RS27020 | Not Available | Negative | 6264572 - 6265426 | 30566.3 |
| tetr/acrr family transcriptional regulator | CD58_RS27025 | Not Available | Negative | 6265462 - 6266133 | 25837.0 |
| coniferyl aldehyde dehydrogenase | CD58_RS27030 | Not Available | Positive | 6266282 - 6267712 | 52357.6 |
| hypothetical protein | CD58_RS27035 | Not Available | Positive | 6267740 - 6268285 | 19289.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
