Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | CD58_RS26940 | Not Available | Positive | 6250019 - 6250615 | 21256.5 |
| radical sam family heme chaperone hemw | CD58_RS26945 | Not Available | Positive | 6250678 - 6251811 | 42014.9 |
| duf3392 domain-containing protein | CD58_RS26950 | Not Available | Positive | 6251833 - 6252156 | 11489.5 |
| trna (guanosine(46)-n7)-methyltransferase trmb | CD58_RS26955 | Not Available | Negative | 6252288 - 6253013 | 27148.7 |
| thiazole synthase | CD58_RS26960 | Not Available | Negative | 6253023 - 6253817 | 28297.8 |
| sulfur carrier protein this | CD58_RS26965 | Not Available | Negative | 6253874 - 6254074 | 7057.38 |
| duf423 domain-containing protein | CD58_RS26970 | Not Available | Negative | 6254166 - 6254546 | 13338.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CD58_RS26975 | Not Available | Positive | 6254620 - 6255342 | 27311.9 |
| rna polymerase sigma factor rpoh | CD58_RS26980 | Not Available | Negative | 6255525 - 6256379 | 32629.7 |
| permease-like cell division protein ftsx | CD58_RS26985 | Not Available | Negative | 6256492 - 6257514 | 36871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
