Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | CD58_RS26890 | Not Available | Positive | 6241436 - 6242707 | 43971.8 |
| nine protein | CD58_RS26895 | Not Available | Negative | 6242840 - 6243268 | 16353.0 |
| c40 family peptidase | CD58_RS26900 | Not Available | Positive | 6243518 - 6244129 | 22589.2 |
| type iv pilus twitching motility protein pilt | CD58_RS26905 | Not Available | Negative | 6244292 - 6245326 | 38158.1 |
| yggs family pyridoxal phosphate-dependent enzyme | CD58_RS26910 | Not Available | Positive | 6245380 - 6246066 | 24601.3 |
| pyrroline-5-carboxylate reductase | CD58_RS26915 | Not Available | Positive | 6246103 - 6246921 | 28312.1 |
| yggt family protein | CD58_RS26920 | Not Available | Positive | 6246932 - 6247522 | 21611.0 |
| homoserine o-acetyltransferase | CD58_RS26925 | Not Available | Positive | 6247794 - 6248933 | 41564.2 |
| methionine biosynthesis protein metw | CD58_RS26930 | Not Available | Positive | 6248941 - 6249561 | 23465.0 |
| duf4426 domain-containing protein | CD58_RS26935 | Not Available | Positive | 6249588 - 6250022 | 15988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
