Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-independent malonate decarboxylase subunit gamma | CD58_RS26795 | Not Available | Negative | 6219300 - 6220103 | 28261.9 |
| biotin-independent malonate decarboxylase subunit beta | CD58_RS26800 | Not Available | Negative | 6220100 - 6220951 | 30243.4 |
| malonate decarboxylase subunit delta | CD58_RS26805 | Not Available | Negative | 6220944 - 6221243 | 10713.8 |
| triphosphoribosyl-dephospho-coa synthase | CD58_RS26810 | Not Available | Negative | 6221243 - 6222118 | 30134.4 |
| malonate decarboxylase subunit alpha | CD58_RS26815 | Not Available | Negative | 6222119 - 6223789 | 60970.7 |
| metal abc transporter atp-binding protein | CD58_RS26820 | Not Available | Negative | 6224040 - 6224464 | 15525.9 |
| nucleotidyltransferase domain-containing protein | CD58_RS26825 | Not Available | Negative | 6224427 - 6225056 | 23246.0 |
| metal abc transporter atp-binding protein | CD58_RS31570 | Not Available | Negative | 6225327 - 6225505 | 6374.46 |
| chemotaxis protein chew | CD58_RS26830 | Not Available | Negative | 6226143 - 6226613 | 17372.2 |
| hpt domain-containing protein | CD58_RS26835 | Not Available | Negative | 6226606 - 6232536 | 217540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
