Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CD58_RS26745 | Not Available | Positive | 6210521 - 6211240 | 26403.8 |
| transporter substrate-binding domain-containing protein | CD58_RS26750 | Not Available | Negative | 6211378 - 6212280 | 33238.8 |
| d-amino acid dehydrogenase | CD58_RS26755 | Not Available | Negative | 6212304 - 6213545 | 44810.0 |
| lysr family transcriptional regulator | CD58_RS26760 | Not Available | Positive | 6213651 - 6214571 | 32654.6 |
| paqr family membrane homeostasis protein trha | CD58_RS26765 | Not Available | Negative | 6214568 - 6215185 | 22607.4 |
| lysr substrate-binding domain-containing protein | CD58_RS26770 | Not Available | Positive | 6215482 - 6216396 | 34196.6 |
| malonate transporter subunit madm | CD58_RS26775 | Not Available | Negative | 6216536 - 6217300 | 25469.1 |
| malonate transporter subunit madl | CD58_RS26780 | Not Available | Negative | 6217306 - 6217698 | 13264.9 |
| malonate decarboxylase subunit epsilon | CD58_RS26785 | Not Available | Negative | 6217766 - 6218686 | 32401.1 |
| malonate decarboxylase holo-acp synthase | CD58_RS26790 | Not Available | Negative | 6218683 - 6219306 | 22970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
