Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate/nitrite transporter family protein | CD58_RS26695 | Not Available | Negative | 6197824 - 6198705 | 32261.6 |
| acyl-coa thioesterase | CD58_RS26700 | Not Available | Negative | 6198956 - 6199357 | 15015.0 |
| adenosylhomocysteinase | CD58_RS26705 | Not Available | Positive | 6199680 - 6201089 | 51322.9 |
| methylenetetrahydrofolate reductase | CD58_RS26710 | Not Available | Positive | 6201251 - 6202096 | 31495.3 |
| metal abc transporter atp-binding protein | CD58_RS26715 | Not Available | Positive | 6202252 - 6203033 | 29471.7 |
| dead/deah box helicase | CD58_RS26720 | Not Available | Positive | 6203295 - 6205172 | 67880.6 |
| ycei family protein | CD58_RS26725 | Not Available | Negative | 6205421 - 6206017 | 21020.8 |
| cytochrome b | CD58_RS26730 | Not Available | Negative | 6206050 - 6206601 | 20146.0 |
| flavin monoamine oxidase family protein | CD58_RS26735 | Not Available | Negative | 6206911 - 6208683 | 62722.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CD58_RS26740 | Not Available | Positive | 6208908 - 6210314 | 52348.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
