Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS26645 | Not Available | Positive | 6187642 - 6188636 | 35766.0 |
| methionine adenosyltransferase | CD58_RS26650 | Not Available | Positive | 6188656 - 6189846 | 42538.6 |
| lyse family translocator | CD58_RS26655 | Not Available | Negative | 6190102 - 6190722 | 21967.4 |
| nad-dependent dna ligase ligb | CD58_RS26660 | Not Available | Positive | 6190931 - 6192604 | 62260.4 |
| duf1090 domain-containing protein | CD58_RS26665 | Not Available | Positive | 6192696 - 6193100 | 14774.6 |
| c-type cytochrome | CD58_RS26670 | Not Available | Negative | 6193239 - 6193688 | 16557.8 |
| murein transglycosylase a | CD58_RS26675 | Not Available | Positive | 6193814 - 6195001 | 42637.9 |
| mapeg family protein | CD58_RS26680 | Not Available | Negative | 6195154 - 6195537 | 14041.4 |
| eama family transporter | CD58_RS26685 | Not Available | Negative | 6195587 - 6196420 | 30642.2 |
| mfs transporter | CD58_RS26690 | Not Available | Positive | 6196616 - 6197776 | 39840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
