Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS26600 | Not Available | Positive | 6178998 - 6179282 | 10249.2 |
| type ii toxin-antitoxin system pard family antitoxin | CD58_RS26605 | Not Available | Positive | 6179412 - 6179690 | 10116.0 |
| ricin domain-containing protein | CD58_RS26610 | Not Available | Positive | 6179957 - 6180466 | 19142.3 |
| class ii fructose-bisphosphate aldolase | CD58_RS26615 | Not Available | Negative | 6181004 - 6182068 | 38412.0 |
| mlic family protein | CD58_RS26620 | Not Available | Negative | 6182314 - 6182649 | 11979.3 |
| hypothetical protein | CD58_RS26625 | Not Available | Negative | 6182706 - 6182933 | 7982.4 |
| phosphoglycerate kinase | CD58_RS26630 | Not Available | Negative | 6182965 - 6184128 | 40179.3 |
| erythrose-4-phosphate dehydrogenase | CD58_RS26635 | Not Available | Negative | 6184153 - 6185223 | 38735.0 |
| transketolase | CD58_RS26640 | Not Available | Negative | 6185372 - 6187369 | 72546.8 |
| hypothetical protein | CD58_RS31025 | Not Available | Positive | 6187400 - 6187630 | 8503.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
