Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CD58_RS26550 | Not Available | Positive | 6167043 - 6168221 | 42482.9 |
| yccs family putative transporter | CD58_RS26555 | Not Available | Positive | 6168498 - 6170681 | 80434.9 |
| substrate-binding periplasmic protein | CD58_RS26560 | Not Available | Negative | 6170803 - 6171540 | 27785.5 |
| gnat family n-acetyltransferase | CD58_RS26565 | Not Available | Positive | 6171802 - 6172254 | 16878.2 |
| helix-turn-helix domain-containing protein | CD58_RS26570 | Not Available | Negative | 6172353 - 6172649 | 11025.1 |
| m48 family metallopeptidase | CD58_RS26575 | Not Available | Negative | 6172654 - 6173157 | 19504.5 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS26580 | Not Available | Negative | 6173199 - 6175322 | 79470.7 |
| polysaccharide lyase family 7 protein | CD58_RS26585 | Not Available | Positive | 6175646 - 6176311 | 24114.3 |
| polysaccharide lyase family 7 protein | CD58_RS26590 | Not Available | Positive | 6176592 - 6177260 | 24671.3 |
| polysaccharide lyase family 7 protein | CD58_RS26595 | Not Available | Positive | 6177591 - 6178259 | 24777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
