Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lola family protein | CD58_RS02165 | Not Available | Negative | 507192 - 507785 | 22273.8 |
| acyl-coa thioesterase | CD58_RS02170 | Not Available | Negative | 507782 - 508207 | 16064.5 |
| histidine ammonia-lyase | CD58_RS02175 | Not Available | Negative | 508197 - 509744 | 56310.8 |
| glycosyl transferase | CD58_RS02180 | Not Available | Negative | 509725 - 510669 | 36205.9 |
| glycosyltransferase family 2 protein | CD58_RS02185 | Not Available | Negative | 510666 - 511400 | 27366.1 |
| acyl-coa synthetase family protein | CD58_RS02190 | Not Available | Negative | 511554 - 513227 | 61558.0 |
| membrane protein | CD58_RS02195 | Not Available | Negative | 513224 - 513769 | 20281.8 |
| acyl carrier protein | CD58_RS02200 | Not Available | Negative | 513766 - 514020 | 9662.43 |
| phosphopantetheine-binding protein | CD58_RS02205 | Not Available | Negative | 514030 - 514290 | 9224.92 |
| lysophospholipid acyltransferase family protein | CD58_RS02210 | Not Available | Negative | 514271 - 515080 | 29976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
