Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter substrate-binding protein | CD58_RS26500 | Not Available | Positive | 6152826 - 6153773 | 34169.1 |
| choline abc transporter permease subunit | CD58_RS26505 | Not Available | Positive | 6153840 - 6154685 | 30281.3 |
| choline abc transporter atp-binding protein | CD58_RS26510 | Not Available | Positive | 6154682 - 6155860 | 43632.2 |
| transcriptional regulator beti | CD58_RS26515 | Not Available | Positive | 6156337 - 6156957 | 22716.3 |
| betaine-aldehyde dehydrogenase | CD58_RS26520 | Not Available | Positive | 6157037 - 6158509 | 53060.1 |
| choline dehydrogenase | CD58_RS26525 | Not Available | Positive | 6158728 - 6160431 | 62611.6 |
| tldd/pmba family protein | CD58_RS26530 | Not Available | Positive | 6160800 - 6162242 | 52697.1 |
| tldd/pmba family protein | CD58_RS26535 | Not Available | Positive | 6162242 - 6163579 | 48897.5 |
| multidrug transporter subunit mdtd | CD58_RS26540 | Not Available | Positive | 6163777 - 6165204 | 50701.7 |
| atp-dependent rna helicase dbpa | CD58_RS26545 | Not Available | Positive | 6165511 - 6166848 | 48350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
