Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CD58_RS26450 | Not Available | Negative | 6141217 - 6142392 | 43070.5 |
| glxa family transcriptional regulator | CD58_RS26455 | Not Available | Negative | 6142461 - 6143420 | 36009.4 |
| choline abc transporter substrate-binding protein | CD58_RS26460 | Not Available | Positive | 6143641 - 6144585 | 34312.4 |
| 3-keto-5-aminohexanoate cleavage protein | CD58_RS26465 | Not Available | Positive | 6144657 - 6145544 | 31408.2 |
| l-carnitine dehydrogenase | CD58_RS26470 | Not Available | Positive | 6145729 - 6146694 | 34580.4 |
| thioesterase family protein | CD58_RS26475 | Not Available | Positive | 6146876 - 6147352 | 17772.2 |
| gamma-butyrobetaine dioxygenase | CD58_RS26480 | Not Available | Positive | 6147375 - 6148538 | 44031.3 |
| hypothetical protein | CD58_RS26485 | Not Available | Positive | 6148920 - 6149183 | 9561.62 |
| glxa family transcriptional regulator | CD58_RS26490 | Not Available | Negative | 6149327 - 6150430 | 40889.4 |
| l-serine ammonia-lyase | CD58_RS26495 | Not Available | Negative | 6151020 - 6152396 | 49202.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
