Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | CD58_RS26400 | Not Available | Negative | 6131199 - 6132419 | 42931.3 |
| dimethylglycine demethylation protein dgcb | CD58_RS26405 | Not Available | Negative | 6132419 - 6134368 | 70412.8 |
| dimethylglycine demethylation protein dgca | CD58_RS26410 | Not Available | Negative | 6134576 - 6136636 | 75639.9 |
| duf5943 domain-containing protein | CD58_RS26415 | Not Available | Negative | 6136652 - 6137182 | 19724.6 |
| dipeptidase | CD58_RS26420 | Not Available | Negative | 6137263 - 6138240 | 35925.0 |
| lysozyme inhibitor lpri family protein | CD58_RS26425 | Not Available | Positive | 6138476 - 6138877 | 14659.1 |
| type ii toxin-antitoxin system rele family toxin | CD58_RS26430 | Not Available | Positive | 6138980 - 6139234 | 9715.85 |
| helix-turn-helix domain-containing protein | CD58_RS26435 | Not Available | Positive | 6139218 - 6139541 | 11909.2 |
| hypothetical protein | CD58_RS26440 | Not Available | Positive | 6139764 - 6140540 | 28587.1 |
| duf3010 family protein | CD58_RS26445 | Not Available | Positive | 6140627 - 6141043 | 15004.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
