Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | CD58_RS26350 | Not Available | Negative | 6115196 - 6116449 | 44591.1 |
| trax family protein | CD58_RS26355 | Not Available | Negative | 6116755 - 6117459 | 25886.6 |
| threonine aldolase family protein | CD58_RS26360 | Not Available | Positive | 6117655 - 6118695 | 38120.2 |
| glycine-betaine demethylase subunit gbcb | CD58_RS26365 | Not Available | Negative | 6118850 - 6119950 | 40546.6 |
| glycine-betaine demethylase subunit gbca | CD58_RS26370 | Not Available | Positive | 6120232 - 6121527 | 48762.4 |
| metallophosphoesterase | CD58_RS26375 | Not Available | Negative | 6121642 - 6122886 | 46665.2 |
| c-type cytochrome | CD58_RS26380 | Not Available | Negative | 6122914 - 6124782 | 69891.5 |
| gmc oxidoreductase | CD58_RS26385 | Not Available | Negative | 6124937 - 6128389 | 126419.0 |
| gnat family n-acetyltransferase | CD58_RS26390 | Not Available | Negative | 6129526 - 6130092 | 21113.1 |
| electron transfer flavoprotein subunit beta | CD58_RS26395 | Not Available | Negative | 6130416 - 6131186 | 26773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
