Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS26255 | Not Available | Positive | 6095528 - 6096826 | 46932.8 |
| glutathione s-transferase n-terminal domain-containing protein | CD58_RS26260 | Not Available | Positive | 6096928 - 6097557 | 23431.4 |
| hypothetical protein | CD58_RS31170 | Not Available | Negative | 6097554 - 6097814 | 8760.53 |
| cell envelope integrity protein cred | CD58_RS26270 | Not Available | Negative | 6097811 - 6099184 | 50589.6 |
| alpha/beta hydrolase | CD58_RS26275 | Not Available | Negative | 6099239 - 6100213 | 35377.5 |
| two-component system sensor histidine kinase crec | CD58_RS26280 | Not Available | Negative | 6100385 - 6101803 | 52342.1 |
| two-component system response regulator creb | CD58_RS26285 | Not Available | Negative | 6101803 - 6102483 | 25025.9 |
| atp-dependent zinc protease | CD58_RS26290 | Not Available | Negative | 6102553 - 6103059 | 18620.4 |
| acyltransferase | CD58_RS26295 | Not Available | Positive | 6103352 - 6104239 | 33959.5 |
| duf2780 domain-containing protein | CD58_RS26300 | Not Available | Negative | 6104240 - 6104818 | 18993.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
