Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein r | CD58_RS26205 | Not Available | Negative | 6082740 - 6083258 | 18766.7 |
| malate synthase g | CD58_RS26210 | Not Available | Positive | 6083704 - 6085881 | 78767.9 |
| response regulator | CD58_RS26215 | Not Available | Negative | 6086100 - 6086546 | 16087.7 |
| putative nucleotidyltransferase substrate binding domain-containing protein | CD58_RS26220 | Not Available | Positive | 6086801 - 6088741 | 72403.2 |
| polc-type dna polymerase iii | CD58_RS26225 | Not Available | Positive | 6088738 - 6089445 | 26512.9 |
| rna polymerase sigma factor | CD58_RS26230 | Not Available | Positive | 6089617 - 6090135 | 19488.6 |
| fecr domain-containing protein | CD58_RS26235 | Not Available | Positive | 6090132 - 6091106 | 35918.0 |
| tonb-dependent siderophore receptor | CD58_RS26240 | Not Available | Positive | 6091358 - 6093796 | 88761.8 |
| pepsy-associated tm helix domain-containing protein | CD58_RS26245 | Not Available | Positive | 6094016 - 6095146 | 41754.5 |
| hypothetical protein | CD58_RS26250 | Not Available | Positive | 6095143 - 6095322 | 6308.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
