Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline-quinone synthase pqqc | CD58_RS26105 | Not Available | Positive | 6059589 - 6060341 | 28858.3 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | CD58_RS26110 | Not Available | Positive | 6060338 - 6060613 | 10373.3 |
| pyrroloquinoline quinone biosynthesis protein pqqe | CD58_RS26115 | Not Available | Positive | 6060585 - 6061754 | 43882.3 |
| alpha/beta hydrolase family protein | CD58_RS26120 | Not Available | Positive | 6061720 - 6063549 | 67275.3 |
| yqae/pmp3 family membrane protein | CD58_RS29625 | Not Available | Negative | 6063629 - 6063787 | 5717.51 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | CD58_RS26130 | Not Available | Negative | 6064134 - 6065912 | 63819.0 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | CD58_RS26135 | Not Available | Negative | 6066052 - 6067848 | 64520.6 |
| ggdef domain-containing protein | CD58_RS26140 | Not Available | Negative | 6067940 - 6069229 | 48083.8 |
| phenylacyl-coa dehydrogenase | CD58_RS26145 | Not Available | Negative | 6069561 - 6071366 | 65598.8 |
| hypothetical protein | CD58_RS26150 | Not Available | Negative | 6071644 - 6071940 | 10530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
