Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 6048597 - 6048673 | Not Available |
| hypothetical protein | CD58_RS26065 | Not Available | Positive | 6049210 - 6051573 | 87158.9 |
| lrp/asnc family transcriptional regulator | CD58_RS26070 | Not Available | Positive | 6051609 - 6052070 | 16758.4 |
| xre family transcriptional regulator | CD58_RS26075 | Not Available | Negative | 6052106 - 6052420 | 11873.3 |
| type ii toxin-antitoxin system rele/pare family toxin | CD58_RS26080 | Not Available | Negative | 6052413 - 6052778 | 14233.7 |
| flavin monoamine oxidase family protein | CD58_RS26085 | Not Available | Positive | 6053141 - 6054823 | 62343.3 |
| carbon-nitrogen hydrolase family protein | CD58_RS26090 | Not Available | Positive | 6054836 - 6055630 | 29126.7 |
| pyrroloquinoline quinone biosynthesis protein pqqf | CD58_RS26095 | Not Available | Positive | 6055721 - 6058150 | 89245.4 |
| pyrroloquinoline quinone precursor peptide pqqa | CD58_RS29620 | Not Available | Positive | 6058308 - 6058382 | 2869.49 |
| pyrroloquinoline quinone biosynthesis protein pqqb | CD58_RS26100 | Not Available | Positive | 6058464 - 6059375 | 33164.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
