Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease | CD58_RS02115 | Not Available | Negative | 497166 - 497612 | 15549.8 |
| beta-ketoacyl-acp synthase | CD58_RS02120 | Not Available | Negative | 497655 - 498881 | 44082.2 |
| 3-oxoacyl-acp reductase fabg | CD58_RS02125 | Not Available | Negative | 498881 - 499609 | 25647.2 |
| hotdog family protein | CD58_RS02130 | Not Available | Negative | 499606 - 500073 | 16909.3 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CD58_RS02135 | Not Available | Negative | 500070 - 501266 | 41922.6 |
| hypothetical protein | CD58_RS02140 | Not Available | Negative | 501263 - 501745 | 18054.0 |
| class i sam-dependent methyltransferase | CD58_RS02145 | Not Available | Negative | 501742 - 502470 | 27917.3 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS02150 | Not Available | Negative | 502481 - 503728 | 45719.1 |
| hypothetical protein | CD58_RS02155 | Not Available | Negative | 503715 - 504872 | 42229.7 |
| mmpl family transporter | CD58_RS02160 | Not Available | Negative | 504869 - 507208 | 84154.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
