Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | CD58_RS26005 | Not Available | Positive | 6034394 - 6035959 | 61106.3 |
| multifunctional cca addition/repair protein | CD58_RS26010 | Not Available | Positive | 6036023 - 6037249 | 45759.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CD58_RS26015 | Not Available | Negative | 6037403 - 6037921 | 19030.1 |
| dihydroneopterin aldolase | CD58_RS26020 | Not Available | Negative | 6037912 - 6038265 | 13097.6 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | CD58_RS26025 | Not Available | Positive | 6038340 - 6038909 | 20312.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CD58_RS26030 | Not Available | Negative | 6038918 - 6039943 | 36504.4 |
| 30s ribosomal protein s21 | CD58_RS26035 | Not Available | Positive | 6040143 - 6040358 | 8386.25 |
| dna primase | CD58_RS26040 | Not Available | Positive | 6040841 - 6042799 | 72991.4 |
| rna polymerase sigma factor rpod | CD58_RS26045 | Not Available | Positive | 6042867 - 6044714 | 69372.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS26050 | Not Available | Positive | 6044838 - 6048581 | 139527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
