Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | CD58_RS25955 | Not Available | Negative | 6022003 - 6023028 | 38749.5 |
| lps-assembly protein lptd | CD58_RS25960 | Not Available | Positive | 6023159 - 6025957 | 104990.0 |
| peptidylprolyl isomerase | CD58_RS25965 | Not Available | Positive | 6025938 - 6027254 | 48761.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CD58_RS25970 | Not Available | Positive | 6027251 - 6028240 | 35080.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CD58_RS25975 | Not Available | Positive | 6028237 - 6029055 | 30081.2 |
| co2+/mg2+ efflux protein apag | CD58_RS25980 | Not Available | Positive | 6029170 - 6029550 | 13916.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | CD58_RS25985 | Not Available | Positive | 6029550 - 6030428 | 32885.4 |
| thiosulfate sulfurtransferase glpe | CD58_RS25990 | Not Available | Positive | 6030462 - 6030791 | 11812.7 |
| prka family serine protein kinase | CD58_RS25995 | Not Available | Positive | 6031091 - 6033013 | 73853.6 |
| yeah/yhbh family protein | CD58_RS26000 | Not Available | Positive | 6033126 - 6034397 | 48667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
