Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | CD58_RS25905 | Not Available | Negative | 6009937 - 6011085 | 39853.5 |
| abc transporter permease | CD58_RS25910 | Not Available | Negative | 6011289 - 6012113 | 29542.2 |
| abc transporter permease | CD58_RS25915 | Not Available | Negative | 6012127 - 6013374 | 45718.8 |
| abc transporter substrate-binding protein | CD58_RS25920 | Not Available | Negative | 6013601 - 6014644 | 37856.9 |
| abc transporter atp-binding protein | CD58_RS25925 | Not Available | Negative | 6014695 - 6015819 | 41263.7 |
| response regulator transcription factor | CD58_RS25930 | Not Available | Negative | 6016171 - 6016800 | 22790.1 |
| pas domain s-box protein | CD58_RS25935 | Not Available | Negative | 6016922 - 6019318 | 89823.0 |
| alpha/beta hydrolase family protein | CD58_RS25940 | Not Available | Positive | 6019393 - 6020388 | 35465.9 |
| terb family tellurite resistance protein | CD58_RS25945 | Not Available | Negative | 6020566 - 6021333 | 28566.4 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | CD58_RS25950 | Not Available | Negative | 6021335 - 6022006 | 24140.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
