Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine decarboxylase | CD58_RS25855 | Not Available | Negative | 6001212 - 6002006 | 30387.8 |
| osmc family protein | CD58_RS25860 | Not Available | Negative | 6002246 - 6002668 | 15136.5 |
| camp-activated global transcriptional regulator crp | CD58_RS25865 | Not Available | Positive | 6002900 - 6003544 | 24271.8 |
| biotin/lipoate a/b protein ligase family protein | CD58_RS25870 | Not Available | Negative | 6003541 - 6004242 | 25210.3 |
| indole-3-glycerol phosphate synthase trpc | CD58_RS25875 | Not Available | Negative | 6004247 - 6005083 | 30472.8 |
| anthranilate phosphoribosyltransferase | CD58_RS25880 | Not Available | Negative | 6005080 - 6006129 | 37281.9 |
| aminodeoxychorismate/anthranilate synthase component ii | CD58_RS25885 | Not Available | Negative | 6006139 - 6006732 | 21792.3 |
| anthranilate synthase component i | CD58_RS25890 | Not Available | Negative | 6006817 - 6008298 | 54402.3 |
| phosphoglycolate phosphatase | CD58_RS25895 | Not Available | Negative | 6008369 - 6009187 | 29968.6 |
| ribulose-phosphate 3-epimerase | CD58_RS25900 | Not Available | Negative | 6009184 - 6009858 | 24060.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
