Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | CD58_RS25805 | Not Available | Positive | 5992399 - 5993814 | 50935.3 |
| anhydro-n-acetylmuramic acid kinase | CD58_RS25810 | Not Available | Positive | 5993818 - 5994909 | 38654.4 |
| iron-sulfur cluster insertion protein erpa | CD58_RS25815 | Not Available | Negative | 5994979 - 5995329 | 12573.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | CD58_RS25820 | Not Available | Negative | 5995485 - 5996519 | 36630.1 |
| protoporphyrinogen oxidase hemj | CD58_RS25825 | Not Available | Positive | 5996654 - 5997085 | 16554.9 |
| nad(p)h-dependent flavin oxidoreductase | CD58_RS25830 | Not Available | Positive | 5997122 - 5998090 | 34413.4 |
| duf805 domain-containing protein | CD58_RS25835 | Not Available | Positive | 5998137 - 5999126 | 35221.8 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS25840 | Not Available | Positive | 5999189 - 5999977 | 29090.7 |
| histidine triad nucleotide-binding protein | CD58_RS25845 | Not Available | Positive | 6000060 - 6000398 | 12754.5 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | CD58_RS25850 | Not Available | Positive | 6000475 - 6001122 | 23912.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
