Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | CD58_RS25705 | Not Available | Negative | 5977733 - 5978098 | 12457.0 |
| 50s ribosomal protein l10 | CD58_RS25710 | Not Available | Negative | 5978177 - 5978677 | 17661.3 |
| 50s ribosomal protein l1 | CD58_RS25715 | Not Available | Negative | 5978876 - 5979571 | 24111.3 |
| 50s ribosomal protein l11 | CD58_RS25720 | Not Available | Negative | 5979571 - 5980002 | 14913.1 |
| transcription termination/antitermination protein nusg | CD58_RS25725 | Not Available | Negative | 5980120 - 5980653 | 20023.1 |
| preprotein translocase subunit sece | CD58_RS25730 | Not Available | Negative | 5980663 - 5981031 | 13211.7 |
| Trna-trp | Not Available | Not Available | Positive | 5981077 - 5981152 | Not Available |
| elongation factor tu | CD58_RS25740 | Not Available | Negative | 5981206 - 5982399 | 43588.4 |
| Trna-thr | Not Available | Not Available | Positive | 5982484 - 5982559 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5982586 - 5982659 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
