Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | CD58_RS25655 | Not Available | Negative | 5962558 - 5962857 | 10945.3 |
| 50s ribosomal protein l4 | CD58_RS25660 | Not Available | Negative | 5962854 - 5963456 | 21890.3 |
| 50s ribosomal protein l3 | CD58_RS25665 | Not Available | Negative | 5963469 - 5964104 | 22593.1 |
| 30s ribosomal protein s10 | CD58_RS25670 | Not Available | Negative | 5964185 - 5964496 | 11753.3 |
| elongation factor tu | CD58_RS25675 | Not Available | Negative | 5964654 - 5965847 | 43424.4 |
| elongation factor g | CD58_RS25680 | Not Available | Negative | 5965878 - 5967983 | 77244.5 |
| 30s ribosomal protein s7 | CD58_RS25685 | Not Available | Negative | 5968014 - 5968484 | 17648.6 |
| 30s ribosomal protein s12 | CD58_RS25690 | Not Available | Negative | 5968587 - 5968958 | 13753.7 |
| dna-directed rna polymerase subunit beta' | CD58_RS25695 | Not Available | Negative | 5969175 - 5973374 | 154657.0 |
| dna-directed rna polymerase subunit beta | CD58_RS25700 | Not Available | Negative | 5973439 - 5977512 | 151073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
