Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gsph | CD58_RS02065 | Not Available | Positive | 485239 - 485706 | 17072.8 |
| type ii secretion system minor pseudopilin gspi | CD58_RS02070 | Not Available | Positive | 485699 - 486085 | 14351.3 |
| type ii secretion system protein gspj | CD58_RS02075 | Not Available | Positive | 486078 - 486611 | 19851.0 |
| type ii secretion system protein gspk | CD58_RS02080 | Not Available | Positive | 486608 - 487453 | 30830.7 |
| type ii secretion system protein gspl | CD58_RS02085 | Not Available | Positive | 487453 - 488556 | 41525.6 |
| type ii secretion system protein gspm | CD58_RS02090 | Not Available | Positive | 488556 - 489017 | 16982.4 |
| mfs transporter | CD58_RS02095 | Not Available | Negative | 489035 - 490312 | 45300.0 |
| lysr family transcriptional regulator | CD58_RS02100 | Not Available | Positive | 490432 - 491337 | 33237.1 |
| 7-cyano-7-deazaguanine synthase quec | CD58_RS02105 | Not Available | Negative | 491847 - 492542 | 25475.6 |
| dermonecrotic toxin domain-containing protein | CD58_RS02110 | Not Available | Negative | 492798 - 496874 | 150956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
