Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | CD58_RS25510 | Not Available | Positive | 5942798 - 5943361 | 20165.0 |
| single-stranded dna-binding protein | CD58_RS25515 | Not Available | Negative | 5943451 - 5943975 | 19410.7 |
| mfs transporter | CD58_RS25520 | Not Available | Negative | 5943985 - 5945382 | 49478.0 |
| excinuclease abc subunit uvra | CD58_RS25525 | Not Available | Positive | 5945562 - 5948396 | 104390.0 |
| bacterioferritin | CD58_RS25530 | Not Available | Negative | 5948498 - 5948962 | 18189.7 |
| catalase | CD58_RS25535 | Not Available | Negative | 5949120 - 5950568 | 53649.7 |
| 50s ribosomal protein l17 | CD58_RS25540 | Not Available | Negative | 5950791 - 5951177 | 14432.6 |
| dna-directed rna polymerase subunit alpha | CD58_RS25545 | Not Available | Negative | 5951220 - 5952221 | 36633.9 |
| 30s ribosomal protein s4 | CD58_RS25550 | Not Available | Negative | 5952244 - 5952864 | 23077.7 |
| 30s ribosomal protein s11 | CD58_RS25555 | Not Available | Negative | 5952883 - 5953272 | 13616.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
