Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar nucleotide-binding protein | CD58_RS25460 | Not Available | Negative | 5927263 - 5928147 | 32521.9 |
| dead/deah box helicase | CD58_RS25465 | Not Available | Positive | 5928459 - 5932772 | 158374.0 |
| mechanosensitive ion channel family protein | CD58_RS25470 | Not Available | Negative | 5932981 - 5935056 | 75822.4 |
| duf72 domain-containing protein | CD58_RS25475 | Not Available | Positive | 5935386 - 5936312 | 35536.3 |
| endonuclease/exonuclease/phosphatase family protein | CD58_RS25480 | Not Available | Positive | 5936309 - 5937121 | 30610.7 |
| cardiolipin synthase clsb | CD58_RS25485 | Not Available | Positive | 5937115 - 5938416 | 49830.0 |
| lysylphosphatidylglycerol synthase domain-containing protein | CD58_RS25490 | Not Available | Positive | 5938403 - 5939407 | 36618.1 |
| alpha/beta hydrolase family protein | CD58_RS25495 | Not Available | Negative | 5939544 - 5940302 | 27883.1 |
| duf3182 family protein | CD58_RS25500 | Not Available | Negative | 5940292 - 5941401 | 40081.2 |
| glxa family transcriptional regulator | CD58_RS25505 | Not Available | Negative | 5941704 - 5942699 | 35263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
