Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybay family lipoprotein | CD58_RS25410 | Not Available | Positive | 5919236 - 5919700 | 16414.0 |
| class i sam-dependent methyltransferase | CD58_RS25415 | Not Available | Positive | 5919697 - 5920356 | 24307.0 |
| thioredoxin | CD58_RS25420 | Not Available | Positive | 5920537 - 5921409 | 32135.4 |
| hypothetical protein | CD58_RS25425 | Not Available | Negative | 5921452 - 5921832 | 13416.9 |
| duf2796 domain-containing protein | CD58_RS25430 | Not Available | Positive | 5921963 - 5922544 | 20768.4 |
| abc transporter atp-binding protein | CD58_RS25435 | Not Available | Positive | 5922686 - 5923396 | 25836.9 |
| abc transporter permease | CD58_RS25440 | Not Available | Positive | 5923398 - 5924663 | 45964.2 |
| duf3299 domain-containing protein | CD58_RS25445 | Not Available | Positive | 5924675 - 5925193 | 18911.9 |
| ompw/alkl family protein | CD58_RS25450 | Not Available | Positive | 5925454 - 5926152 | 24513.2 |
| nad-dependent epimerase/dehydratase family protein | CD58_RS25455 | Not Available | Negative | 5926341 - 5927270 | 33206.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
