Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | CD58_RS25360 | Not Available | Negative | 5911507 - 5912124 | 22434.1 |
| substrate-binding periplasmic protein | CD58_RS25365 | Not Available | Negative | 5912220 - 5912978 | 28691.5 |
| phosphatidylglycerophosphatase a | CD58_RS25370 | Not Available | Negative | 5912990 - 5913493 | 19313.8 |
| thiamine-phosphate kinase | CD58_RS25375 | Not Available | Negative | 5913490 - 5914455 | 32956.9 |
| transcription antitermination factor nusb | CD58_RS25380 | Not Available | Negative | 5914474 - 5914974 | 18901.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | CD58_RS25385 | Not Available | Negative | 5914971 - 5915447 | 16405.0 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CD58_RS25390 | Not Available | Negative | 5915697 - 5916788 | 39466.9 |
| riboflavin synthase | CD58_RS25395 | Not Available | Negative | 5916805 - 5917467 | 23294.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CD58_RS25400 | Not Available | Negative | 5917514 - 5918647 | 40298.6 |
| transcriptional regulator nrdr | CD58_RS25405 | Not Available | Negative | 5918644 - 5919108 | 17839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
