Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | CD58_RS25310 | Not Available | Negative | 5896751 - 5901319 | 166769.0 |
| duf1175 domain-containing protein | CD58_RS25315 | Not Available | Negative | 5901316 - 5901963 | 24266.1 |
| duf2138 domain-containing protein | CD58_RS25320 | Not Available | Negative | 5901960 - 5903669 | 62250.0 |
| yfap family protein | CD58_RS25325 | Not Available | Negative | 5903705 - 5904463 | 27705.5 |
| exodeoxyribonuclease vii small subunit | CD58_RS25330 | Not Available | Positive | 5904982 - 5905224 | 8906.36 |
| (2e,6e)-farnesyl diphosphate synthase | CD58_RS25335 | Not Available | Positive | 5905221 - 5906108 | 31219.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CD58_RS25340 | Not Available | Positive | 5906223 - 5908121 | 68473.6 |
| tonb-dependent receptor domain-containing protein | CD58_RS25345 | Not Available | Positive | 5908286 - 5910166 | 70297.2 |
| cobalamin-binding protein | CD58_RS25350 | Not Available | Negative | 5910294 - 5911091 | 28742.0 |
| hypothetical protein | CD58_RS25355 | Not Available | Negative | 5911091 - 5911510 | 15295.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
