Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS31710 | Not Available | Positive | 5887908 - 5888018 | 3739.47 |
| glutathionylspermidine synthase family protein | CD58_RS25265 | Not Available | Negative | 5888208 - 5889365 | 44130.0 |
| duf1190 domain-containing protein | CD58_RS25270 | Not Available | Negative | 5889378 - 5890082 | 24985.0 |
| duf350 domain-containing protein | CD58_RS25275 | Not Available | Negative | 5890102 - 5890530 | 14845.6 |
| duf2491 family protein | CD58_RS25280 | Not Available | Negative | 5890546 - 5891208 | 24122.2 |
| ion channel | CD58_RS25285 | Not Available | Negative | 5891195 - 5892229 | 36771.5 |
| pspa/im30 family protein | CD58_RS25290 | Not Available | Negative | 5892619 - 5893317 | 25172.7 |
| yjfi family protein | CD58_RS25295 | Not Available | Negative | 5893341 - 5893922 | 21320.5 |
| yfap family protein | CD58_RS25300 | Not Available | Negative | 5894293 - 5895126 | 29558.7 |
| duf2300 domain-containing protein | CD58_RS25305 | Not Available | Negative | 5895130 - 5896749 | 60234.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
